genetools documentation table of contents#
- Quick Start
- API
- Submodules
- genetools.arrays module
convert_matrix_to_one_element_per_row()
get_top_n()
get_top_n_percent()
get_trim_both_sides_mask()
groupby_apply_weighted_value_counts()
make_consensus_sequence()
make_consensus_vector()
make_dummy_variables_in_specific_order()
masked_argmax()
masked_argmin()
numeric_vectors_to_character_arrays()
strings_to_character_arrays()
strings_to_numeric_vectors()
weighted_median()
weighted_mode()
weighted_value_counts()
- genetools.helpers module
- genetools.palette module
- genetools.plots module
add_sample_size_to_labels()
add_sample_size_to_legend()
get_point_size()
plot_color_and_size_dotplot()
plot_confusion_matrix()
plot_triangular_heatmap()
plot_two_key_color_and_size_dotplot()
savefig()
scatterplot()
stacked_bar_plot()
superimpose_group_labels()
two_class_relative_density_plot()
wrap_tick_labels()
- genetools.scanpy_helpers module
- genetools.stats module
ConfusionMatrixValues
accept_series()
clr_normalize()
coclustering()
interpolate_prc()
interpolate_roc()
intersect_marker_genes()
make_confusion_matrix()
normalize_columns()
normalize_rows()
percentile_normalize()
rank_normalize()
run_sigmoid_if_binary_and_softmax_if_multiclass()
softmax()
unpack_confusion_matrix()
- Module contents
- Changelog